Season 1
- 1.01 Pilot pt 1
- 1.02 Pilot pt 2
- 1.03 Tabula Rasa
- 1.04 Walkabout
- 1.05 White Rabit
- 1.06 House of the Rising Sun
- 1.07 The Moth
- 1.08 Confidence Man
- 1.09 Solitary
- 1.10 Raised By Another
- 1.11 All the Best Cowboys Have Daddy Issues
- 1.12 Whatever the Case May Be
- 1.13 Hearts and Minds
- 1.14 Special
- 1.15 Homecoming
- 1.16 Outlaws
- 1.17 ...In Translation
- 1.18 Numbers
- 1.19 Deux Ex Machina
- 1.20 Do No Har,
- 1.21 The Greater Good
- 1.22 Born to Run
- 1.23 Exodus pt1
- 1.24 Exodus pt 2
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Season 2
- 2.01 Man of Science, Man of Faith
- 2.02 Adrift
- 2.03 Orientation
- 2.04 Everybody Hates Hugo
- 2.05 ...And Found
- 2.06 Abandoned
- 2.07 The Other 48 Days
- 2.08 Collision
- 2.09 What Kate Did
- 2.10 The 23rd Psalm
- 2.11 The Hunting Party
- 2.12 Fire + Water
- 2.13 The Long Con
- 2.14 One of Them
- 2.15 Maternity Leave
- 2.16 The Whole Truth
- 2.17 Lockdown
- 2.18 Dave
- 2.19 S.O.S
- 2.20 Two for the Road
- 2.21 ?
- 2.22 Three Minutes
- 2.23 Live Together, Die Alone
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Season 3
- 3.01 A Tale of Two Cities
- 3.02 The Glass Ballerina
- 3.03 Further Instructions
- 3.04 Every Man for Himself
- 3.05 The Cost of Living
- 3.06 I Do'
- 3.07 Not in Portland
- 3.08 Flashes Before Your Eyes
- 3.09 Stranger in a Strange Land
- 3.10 Tricia Tanaka is Dead
- 3.11 Enter 77
- 3.12 Par Avion
- 3.13 The Man from Tallahassee
- 3.14 Exposé
- 3.15 Left Behind
- 3.16 One of Us
- 3.17 Catch-22
- 3.18 D.O.C
- 3.19 The Brig
- 3.20 The Man Behind the Curtain
- 3.21 Greatest Hits
- 3.22 Through the Looking Glass
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